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BNF5106 / BIOL5515 Bioinformatics

Syllabus

Tentative schedule (subject to change):

BioinfoUPGMA_SOM.pptx
DateWeekdayTopicProfessor
09/06/2017WednesdayIntroduction to molecular biologyDrouin
09/11/2017MondayOverview of BioinformaticsXia
09/13/2017WednesdayPreliminary research project assignment and organization issuesXia
09/18/2017MondayFASTA and BLAST algorithms in database searchesXia
09/20/2017WednesdaySequence alignment by dynammic programmingXia
09/25/2017MondayNext-generation sequencing and applicationsXia
09/27/2017WednesdayPWM and PerceptronXia
09/25/2017MondayUPGMA and Self-organizing mapsXia
10/04/2017WednesdayMachine Learning for Bioinformatics ClassifiersGreen
10/09/2017MondayThanksgiving
10/11/2017WednesdayGibbs samplerXia
10/16/2017MondayConstructing network models from expression dataPerkins
10/18/2017WednesdayResearch projects updateXia
10/23/2017MondayReading week
10/25/2017WednesdayReading week
10/30/2017MondayMore on project updatesXia
11/01/2017WednesdayGibbs sampler and its applicationsXia
11/06/2017MondayMolecular phylogenetics: Distance-based methods, (optional) Substitution models Xia
11/08/2017WednesdayRecent ideas for the detection of adaptation in protein-coding genesRodrigue
11/13/2017MondayLightning talksXia
11/15/2017WednesdayChromosomal evolution at the gene order levelSankoff
11/20/2017MondayHigh performance computing for bioinformaticsPalidwor
11/22/2017WednesdayBioinformatics approaches in studying gene regulationIoschikhes
11/27/2017MondayDNA Aptamers: From Biomolecular Interactions to Diagnostics and TherapeuticsBerezovski
11/29/2017WednesdayCourse evaluation; Organization of oral presentations.Xia
12/04/2017MondayStudent oral presentationXia
12/06/2017WednesdayStudent oral presentationXia
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